Web-based molecule sketcher
Open source bioinformatics and computational biology toolbox written in F#. This is the core package containing type models and parsers/writers.
Numerical Encoding for Human Genetic Variants
Nucleic and amino acid primitive types
MerCat: python code for versatile k-mer counting and diversity estimation for database independent property analysis for meta -ome data
Perl and Python scripts allowing to get sequence information from GenBank, RefSeq or ENA sequence repositories
MerCat2: python code for versatile k-mer counting and diversity estimation for database independent property analysis for metaome data
A home for all biological/bioinformatics constants from protein strings to BLOSUM matrices.
Analysis of Sars Cov-2 Gene Mutations using Python Numpy and Matplotlib
deep learning experiments on biological sequences with PyTorch
Solidity implementations of well-known pairwise alignment methods such as Needleman-Wunsch's global sequence alignment and the Smith-Waterman local sequence alignment algorithm.
A python package to compute clusters of sequence feature variant types (SFVTs) based upon user-selected subsequence.
Inferring likelihood and mutation rate of an evolutionary tree through the Jukes-Cantor model and Felsenstein’s algorithm
Produces PDB files from given sequences.
FLiCK - Format LeveragIng Compression frameworK
Protein to RNA reverse translation
A website made for a year-long school project on how store data in DNA, using a nucleotides as our code. The website was made using the Flask framework to incoporate some python programs
Extracts all of the possible genes from a string of DNA
GenSkew is an application for computing and plotting nucleotide skew data.
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