This project dedicated to evaluation and utilization of the Optimus pipeline that was initially developed by Broad Institute, which is a tool for the analysis of single-cell RNA-seq data.
This pipeline is designed to be run on Terra, a cloud-based platform for biomedical research.
The evaluation of the pipeline is done by running it on a 10x 3' dataset and comparing the results with the HCA's results. The dataset used for this evaluation is the 10k PBMCs from a healthy donor dataset.